view scripts/learn-poi.py @ 786:1f2b2d1f4fbf dev

added script and code to learn POIs
author Nicolas Saunier <nicolas.saunier@polymtl.ca>
date Fri, 11 Mar 2016 17:38:48 -0500
parents
children 0a428b449b80
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#! /usr/bin/env python

import argparse

import numpy as np
from sklearn import mixture
import matplotlib.pyplot as plt

import storage, ml

parser = argparse.ArgumentParser(description='The program learns and displays Gaussians fit to beginnings and ends of object trajectories (based on Mohamed Gomaa Mohamed 2015 PhD). TODO: save the data')
parser.add_argument('-d', dest = 'databaseFilename', help = 'name of the Sqlite database file', required = True)
parser.add_argument('-t', dest = 'trajectoryType', help = 'type of trajectories to display', choices = ['feature', 'object'], default = 'object')
parser.add_argument('-n', dest = 'nClusters', help = 'number of point clusters', required = True, type = int)
parser.add_argument('--covariance-type', dest = 'covarianceType', help = 'type of covariance of Gaussian model', default = "full")

args = parser.parse_args()

objects = storage.loadTrajectoriesFromSqlite(args.databaseFilename, args.trajectoryType)

beginnings = []
ends = []
for o in objects:
    beginnings.append(o.getPositionAt(0).aslist())
    ends.append(o.getPositionAt(int(o.length())-1).aslist())

beginnings = np.array(beginnings)
ends = np.array(ends)

gmm = mixture.GMM(n_components=args.nClusters, covariance_type = args.covarianceType)
beginningModel=gmm.fit(beginnings)
gmm = mixture.GMM(n_components=args.nClusters, covariance_type = args.covarianceType)
endModel=gmm.fit(ends)

ml.plotGMMClusters(beginningModel, beginnings)
plt.axis('equal')
plt.title('Origins')
print('Origin Clusters:\n{}'.format(ml.computeClusterSizes(beginningModel.predict(beginnings), range(args.nClusters))))

ml.plotGMMClusters(endModel, ends)
plt.axis('equal')
plt.title('Destinations')
print('Destination Clusters:\n{}'.format(ml.computeClusterSizes(endModel.predict(ends), range(args.nClusters))))